[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 251 items for (author: chen & dl)

EMDB-40180:
MsbA bound to cerastecin C
Method: single particle / : Chen Y, Klein D

EMDB-43931:
CryoEM structure of activated CRAF/MEK/14-3-3 complex with NST-628
Method: single particle / : Quade B, Cohen SE, Huang X

EMDB-43932:
Activated CRAF/MEK heterotetramer from focused refinement of CRAF/MEK/14-3-3 complex
Method: single particle / : Quade B, Cohen SE, Huang X

PDB-9axa:
CryoEM structure of activated CRAF/MEK/14-3-3 complex with NST-628
Method: single particle / : Quade B, Cohen SE, Huang X

PDB-9axc:
Activated CRAF/MEK heterotetramer from focused refinement of CRAF/MEK/14-3-3 complex
Method: single particle / : Quade B, Cohen SE, Huang X

EMDB-41508:
Cryo-EM structure of E3 ubiquitin ligase Doa10 from Saccharomyces cerevisiae
Method: single particle / : Park E, Itskanov SI

EMDB-18245:
Plunge-frozen (control) map of beta-galactosidase
Method: single particle / : Esser TK, Boehning J, Bharat TAM, Rauschenbach S

EMDB-40783:
MBP-tagged fusion fatty acid synthase from S. cerevisiae
Method: single particle / : Mazhab-Jafari MT, Khalili Samani E

EMDB-40784:
MBP tagged and Mixed chain fatty acid synthase, FAS2_deltaACP
Method: single particle / : Mazhab-Jafari MT, Khalili Samani E

EMDB-40785:
MBP tagged mixed chain FAS, fusFAS_deltaACP
Method: single particle / : Mazhab-Jafari MT, Khalili Samani E

EMDB-40821:
Bovine multidrug resistance protein 4 (MRP4) E1202Q mutant bound to ATP in MSP lipid nanodisc
Method: single particle / : Pourmal S, Stroud RM

EMDB-40826:
Bovine multidrug resistance protein 4 (MRP4) bound to DHEA-S in MSP lipid nanodisc
Method: single particle / : Pourmal S, Stroud RM

EMDB-40827:
Bovine multidrug resistance protein 4 (MRP4) bound to prostaglandin E1 in MSP lipid nanodisc
Method: single particle / : Pourmal S, Stroud RM

EMDB-40828:
Inward-facing narrow conformation of bovine multidrug resistance protein 4 (MRP4) in MSP lipid nanodisc
Method: single particle / : Pourmal S, Stroud RM

EMDB-40829:
Inward-facing wide conformation of bovine multidrug resistance protein 4 (MRP4) in MSP lipid nanodisc
Method: single particle / : Pourmal S, Stroud RM

EMDB-40830:
Bovine multidrug resistance protein 4 (MRP4) bound to prostaglandin E2 in MSP lipid nanodisc
Method: single particle / : Pourmal S, Stroud RM

EMDB-18244:
ESIBD structure of beta-galactosidase
Method: single particle / : Esser T, Boehning J, Bharat TAM, Rauschenbach S

PDB-8q7y:
ESIBD structure of beta-galactosidase
Method: single particle / : Esser T, Boehning J, Bharat TAM, Rauschenbach S

EMDB-40856:
Single particle reconstruction of the human LINE-1 ORF2p without substrate (apo)
Method: single particle / : van Eeuwen T, Taylor MS, Rout MP

EMDB-40858:
Structure of LINE-1 ORF2p with template:primer hybrid
Method: single particle / : van Eeuwen T, Taylor MS, Rout MP

EMDB-40859:
Structure of LINE-1 ORF2p with an oligo(A) template
Method: single particle / : van Eeuwen T, Taylor MS, Rout MP

EMDB-40711:
CryoEM structure of Western equine encephalitis virus VLP in complex with the chimeric Du-D1-Mo-D2 MXRA8 receptor
Method: single particle / : Zimmerman MI, Fremont DH, Center for Structural Genomics of Infectious Diseases (CSGID)

PDB-8sqn:
CryoEM structure of Western equine encephalitis virus VLP in complex with the chimeric Du-D1-Mo-D2 MXRA8 receptor
Method: single particle / : Zimmerman MI, Fremont DH, Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)

EMDB-40884:
Human VPS29/VPS35L Complex (Locally refined map)
Method: single particle / : Chen Z, Chen B, Burstein E, Han Y

EMDB-40885:
Human VPS35L/VPS29/VPS26C Complex
Method: single particle / : Chen Z, Chen B, Burstein E, Han Y

EMDB-40886:
Human Retriever VPS35L/VPS29/VPS26C Complex (Composite Map)
Method: single particle / : Chen Z, Chen B, Burstein E, Han Y

PDB-8sym:
Human VPS29/VPS35L Complex (Locally refined map)
Method: single particle / : Chen Z, Chen B, Burstein E, Han Y

PDB-8syn:
Human VPS35L/VPS29/VPS26C Complex
Method: single particle / : Chen Z, Chen B, Burstein E, Han Y

PDB-8syo:
Human Retriever VPS35L/VPS29/VPS26C Complex (Composite Map)
Method: single particle / : Chen Z, Chen B, Burstein E, Han Y

EMDB-29530:
SARS-CoV-2 XBB.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-29531:
SARS-CoV-2 BQ.1.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-40240:
SARS-CoV-2 BN.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-8fxb:
SARS-CoV-2 XBB.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-8fxc:
SARS-CoV-2 BQ.1.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-8s9g:
SARS-CoV-2 BN.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-40305:
Cryo-EM structure of insulin amyloid-like fibril that is composed of two antiparallel protofilaments
Method: single particle / : Wang LW, Hall C, Uchikawa E, Chen DL, Choi E, Zhang XW, Bai XC

EMDB-36241:
Cryo-EM structure of mouse Piezo1-MDFIC complex (consensus map)
Method: single particle / : Zhou Z, Ma X, Lin Y, Cheng D, Bavi N, Li JV, Sutton D, Yao M, Harvey N, Corry B, Zhang Y, Cox CD

EMDB-36242:
Cryo-EM structure of mouse Piezo1-MDFIC complex (Masked refinement of the cap domain)
Method: single particle / : Zhou Z, Ma X, Lin Y, Cheng D, Bavi N, Li JV, Sutton D, Yao M, Harvey N, Corry B, Zhang Y, Cox CD

EMDB-36243:
Cryo-EM structure of mouse Piezo1-MDFIC complex (masked refinement of the transmembrane domain)
Method: single particle / : Zhou Z, Ma X, Lin Y, Cheng D, Bavi N, Li JV, Sutton D, Yao M, Harvey N, Corry B, Zhang Y, Cox CD

EMDB-36244:
Cryo-EM structure of mouse Piezo1-MDFIC(C240A) complex
Method: single particle / : Zhou Z, Ma X, Lin Y, Cheng D, Bavi N, Li JV, Sutton D, Yao M, Harvey N, Corry B, Zhang Y, Cox CD

EMDB-35577:
Cryo-EM structure of mouse Piezo1-MDFIC complex (composite map)
Method: single particle / : Zhou Z, Ma X, Lin Y, Cheng D, Bavi N, Li JV, Sutton D, Yao M, Harvey N, Corry B, Zhang Y, Cox CD

EMDB-16187:
Wild tye immature Gag Structure
Method: subtomogram averaging / : Zhu Y, Chen L, Hardenbrook N, Zhang P

EMDB-16190:
KAKA mutation immature Gag structure
Method: subtomogram averaging / : Zhu Y, Chen L, Hardenbrook N, Zhang P

EMDB-27825:
Cryo-EM structure of the endogenous core TIM23 complex from S. cerevisiae
Method: single particle / : Sim SI, Park E

EMDB-40346:
Cryo-EM structure of the core TIM23 complex from S. cerevisiae
Method: single particle / : Sim SI, Park E

EMDB-28375:
Structure of the human L-type voltage-gated calcium channel Cav1.2 complexed with L-leucine (CABAD Map 2)
Method: single particle / : Chen Z, Mondal A, Abderemane-Ali F, Minor DL

EMDB-28376:
Structure of a human EMC:human Cav1.2 channel complex in GDN detergent (ECAB Map 3)
Method: single particle / : Chen Z, Mondal A, Abderemane-Ali F, Minor DL

EMDB-28561:
Human L-type voltage-gated calcium channel Cav1.2 complexed with L-leucine (Segment Map 01)
Method: single particle / : Chen Z, Mondal A, Abderemane-Ali F, Minor DL

EMDB-28564:
Human L-type voltage-gated calcium channel Cav1.2 complexed with L-leucine (Segment Map 02)
Method: single particle / : Chen Z, Mondal A, Abderemane-Ali F, Minor DL

EMDB-28578:
Human EMC:human Cav1.2 channel complex (Segment map 01)
Method: single particle / : Chen Z, Mondal A, Abderemane-Ali F, Minor DL

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more